Science & research MCP servers

53 listed servers in Health & science. Each row shows the automated checks, the secrets asked for and an install command.

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Science & research servers 53

MCP servers, Science & research, newest updates first
Type Secrets Version Actions
io.github.smdesai27/math-board

A local, view-only chalkboard the model draws on: equations, plots, molecules and diagrams.

4/4All passed62health of 100npmRuns locallyNoneno keys asked0.3.0
★ 1 io.github.SidneyBissoli/uis-mcp-server

UNESCO UIS statistics (education, science, culture) with full provenance and fixed releases.

8/8All passed64health of 100npmLocal or hostedNoneno keys asked1.9.0
com.talindrew/mcp

90 molecular biology tools: plasmid maps, digests, primers, CRISPR, cloning, PubMed, lab notebook.

3/3All passed43health of 100RemoteHostedNoneno keys asked1.0.1
io.github.AnonymousOnyx22/stem-calc-student-mcp

STEM Calc MCP for chemistry and physics homework: molar mass, balancing, units. Works offline.

7/7All passed60health of 100npmRuns locallyNoneno keys asked0.1.0
★ 4 io.github.rkocosmergon/cosmergon

Living economy for AI agents — Conway physics, energy currency, marketplace, reputation.

7/7All passed74health of 100PyPIRuns locallyNoneno keys asked0.27.35
★ 8 io.github.musharna/plant-genomics-mcp

Plant genomics MCP — 58 tools across 24 backends with cross-source synthesis.

7/7All passed72health of 100PyPIRuns locallyNoneno keys asked1.30.0
★ 25 io.github.jurimaxam-dotcom/chemdraw-mcp

Molecule names or SMILES to 2D structures, reactions, mechanisms, spectra - offline via RDKit.

6/71 warning66health of 100PyPIRuns locallyNoneno keys asked0.6.0
io.github.markatdataandbeyond/open-data-mcp

10 tools on official open data: EU VAT/LEI, TED tenders, PubMed, trials, registries, weather.

3/3All passed49health of 100RemoteHostedNoneno keys asked1.0.0
org.sciencelive4all/replication-radar

Turn the OpenAIRE Graph into a ranked replication queue with a Science Live verification overlay.

7/7All passed51health of 100PyPIRuns locally1secret asked0.4.8
★ 1 org.sciencelive4all/forrt-research-mcp

Produce verifiable FORRT nanopublication chains: grounded quote checks and Science Live projections.

7/7All passed52health of 100PyPIRuns locally1secret asked0.2.0
io.github.rcgiri-physics/physverify

Runs physverify checks on physics code. It runs the code it checks: use on trusted code only.

7/7All passed54health of 100PyPIRuns locallyNoneno keys asked0.5.1
★ 1 io.github.konkomaji/opentoonz-mcp

Animate in OpenToonz from an AI assistant: native vector levels, xsheet timing, rigs and physics.

7/7All passed58health of 100PyPIRuns locallyNoneno keys asked0.1.0
★ 28 io.github.u9401066/pubmed-search-mcp

Multi-source biomedical literature search: PubMed, Europe PMC, OpenAlex, full text, citations

7/7All passed58health of 100PyPIRuns locally1secret asked0.8.0
com.glazecalcapp/glazecalc

Ceramic glaze chemistry: unity formulas, limit checks, substitutes, cones and potters' guides.

4/4All passed53health of 100RemoteHostedNoneno keys asked1.1.0
io.github.japanfold/japanfold

Fold proteins, co-fold ligands with binding affinity, design binders and embed sequences.

3/3All passed52health of 100RemoteHostedNoneno keys asked1.0.0
io.github.reutavidan/zetesis

Due diligence on life-science claims: omics, trials, gene therapy. Dimension by dimension.

8/8All passed55health of 100PyPILocal or hosted1secret asked0.2.2
io.github.lilingm963/scifig

Create scientific illustrations, data charts and flowcharts with your SciFig account.

3/3All passed43health of 100RemoteHostedNoneno keys asked1.0.0
org.askcerebrum/cerebrum

Search the scientific literature and get a cited answer, plus the Trending in Science edition.

4/4All passed43health of 100RemoteHostedNoneno keys asked1.0.0
★ 1.8k io.github.mims-harvard/tooluniverse

2,700+ scientific tools for AI scientists: life science, research, literature, and more.

7/81 warning85health of 100PyPIRuns locally16secrets asked1.5.7
★ 2 io.github.w3c-cg/sstim

SSTIM reference for senses, stimuli, perception and scientific contributions.

7/7All passed51health of 100npmRuns locallyNoneno keys asked0.3.0
io.github.danielLuo2/bioharbor

Run real bioinformatics from your AI agent. Reliable, reproducible, on your own GPUs.

7/7All passed57health of 100PyPIRuns locallyNoneno keys asked0.1.6
uk.co.herstack/herstack

Read-only UK women's midlife health guidance: search, PubMed-backed evidence, supplement picks.

4/4All passed43health of 100RemoteHostedNoneno keys asked1.2.1
★ 30 io.github.iowarp/spack-mcp

Structured Spack discovery and installation tools for scientific agents

7/7All passed67health of 100PyPIRuns locallyNoneno keys asked2.3.1
★ 9 io.github.Furox-Art/axiomize

Versioned scientific models with units and SBML, CellML, Modelica export.

7/7All passed53health of 100PyPIRuns locallyNoneno keys asked1.12.4
★ 23 io.github.K-Dense-AI/labmcp-atlas-ezo

MCP server for Atlas Scientific EZO sensor circuits (pH, ORP, DO, EC, RTD, HUM, CO2, PRS) over UART.

7/7All passed57health of 100PyPIRuns locallyNoneno keys asked0.1.2
★ 1 io.github.The-Warl0ck/anvil-mcp

Local physics/chemistry bench as MCP: plain words in, 12-domain simulations out.

7/7All passed55health of 100npmRuns locallyNoneno keys asked0.1.2
★ 1 io.github.brashler/flit

Tiny sphere-physics engine for three.js games: spawn, step, raycast, InstancedMesh-ready positions

7/7All passed57health of 100npmRuns locallyNoneno keys asked0.2.2
★ 1 io.github.Ranshiv/noether-physics

Physics assistant: checked equations, live simulations, claims verified against arXiv papers

7/7All passed50health of 100PyPIRuns locallyNoneno keys asked0.1.2
io.github.jdhart81/neurogenesis

Developmental agents for the agent economy: create an agent from a digital genome, then evolve it wi

4/4All passed43health of 100RemoteHostedNoneno keys asked0.2.0
io.github.physics-star-cat/databutler-uk-exams

UK exam-board spec data: which paper is a topic on, spec structures, past-paper links. Verified.

4/4All passed45health of 100RemoteHostedNoneno keys asked1.0.0
com.hispanic-legacy/hispanic-legacy

Spain's contributions to world science, exploration and culture, rigorously sourced

4/4All passed46health of 100RemoteHostedNoneno keys asked0.6.14
io.github.srikarjy/biolab-mcp-server

Auditable MCP server for PubMed, Europe PMC, ClinicalTrials.gov, and bioRxiv/medRxiv queries

4/4All passed50health of 100RemoteHostedNoneno keys asked0.3.0
★ 7 io.github.surendranb/find-research-papers-mcp

Search open-source research papers across arXiv, OpenAlex, Crossref, PubMed, Semantic Scholar.

7/7All passed63health of 100npmRuns locally1secret asked0.1.0
★ 19 io.github.tatopenn-cell/dense-evolution

Real quantum circuit simulator, VQE, molecular Hamiltonians, QM/MM forces, and MD via 21 tools.

7/7All passed71health of 100PyPIRuns locallyNoneno keys asked8.1.52
★ 1 com.themineworks/academic-research-mcp

Scholarly search: OpenAlex, Crossref, arXiv, OpenCitations and PubMed in one endpoint.

3/3All passed47health of 100RemoteHostedNoneno keys asked1.0.0
★ 86 io.github.patsnap/patent-literature-search-mcp

Search 200M+ patents and 216M+ scientific papers using natural language and structured filters.

3/3All passed50health of 100RemoteHostedNoneno keys asked1.2.0
io.github.jedanderson432/jedanderson-corpus-mcp

MCP access to the jedanderson.org corpus — environmental superintelligence and information physics.

7/7All passed58health of 100npmRuns locallyNoneno keys asked1.0.0
★ 2 io.github.starfetch-js/starfetch

Query public astronomy catalogs through metadata-first TAP and ADQL tools.

7/7All passed52health of 100npmRuns locallyNoneno keys asked0.3.0
★ 213 io.github.Glade-tool/glade-mcp

Control the Unity and Godot editors from AI clients: scenes, scripts, physics, materials.

7/7All passed68health of 100PyPIRuns locallyNoneno keys asked0.7.14
★ 1 io.github.nickjlamb/studydiff

Explain why two scientific papers disagree, every claim grounded in a verbatim source quote.

7/7All passed58health of 100npmRuns locally1secret asked0.2.0
★ 3 io.github.pkotecha-eng/aria-mcp-server

Search 35M+ PubMed, 400K+ ClinicalTrials.gov & ISRCTN trials. Prompts included. No API key.

7/7All passed45health of 100PyPIRuns locallyNoneno keys asked0.2.1
★ 1 io.github.wjgoarxiv/vmd-hydrate-mcp

Drive VMD for GROMACS/LAMMPS analysis + clathrate-hydrate cage science (needs a local VMD)

7/7All passed44health of 100PyPIRuns locallyNoneno keys asked0.2.0
★ 24 io.github.Embassy-of-the-Free-Mind/sourcelibrary

Search 15K rare pre-modern texts translated to English: philosophy, religion, science, literature.

4/4All passed61health of 100RemoteHostedNoneno keys asked4.3.4
★ 1 io.github.islobodan/cruncher-mcp

Scientific calculator MCP server with 43 tools: arithmetic, trig, stats, unit conversion.

7/7All passed44health of 100npmRuns locallyNoneno keys asked1.2.29
★ 1 io.github.WorldWeatherOnline/wwo-mcp

Global weather API: forecasts, historical data, marine, ski, astronomy and timezone.

3/3All passed35health of 100RemoteHostedNoneno keys asked1.0.0
★ 19 io.github.Arielbs/rosetta-mcp-server

Rosetta/PyRosetta protein modeling and Biotite translation for computational biology

7/7All passed45health of 100npmRuns locallyNoneno keys asked1.3.1
★ 2 io.github.rachadele/biolit

LLM-assisted biomedical literature screening and extraction for PubMed, GEO, and preprints.

7/81 warning53health of 100PyPIRuns locally3secrets asked0.1.25
★ 3 io.github.gregario/astronomy-oracle

Astronomical catalog data and observing session planner. 13,000+ objects from OpenNGC.

7/7All passed53health of 100npmRuns locallyNoneno keys asked0.1.0
★ 22 io.github.ammawla/encode-toolkit

20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines

6/71 warning60health of 100npmRuns locallyNoneno keys asked0.3.0-beta.5
★ 1 io.github.cesco345/capital-equipment

Search, book, and manage scientific research equipment across 500+ STEM core facilities.

3/3All passed35health of 100RemoteHostedNoneno keys asked1.0.0

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